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📌 This e-book documents my ongoing journey in bioinformatics engineering, integrating concepts from data science, software development, and biomedical research. Its aim is to systematically curate this learning process and develop a collection of searchable and reusable knowledge resources.
For a complete overview, see the 📚 Table of Contents.
📖 Topics Covered
Next-generation sequencing data analysis, including DNA-seq, RNA-seq, single-cell RNA-seq, and microbiome workflows
Data science methodologies, covering data preprocessing, analysis, and visualization
Statistical foundations and applied statistical analysis for biomedical and computational research
DevOps practices, including containerization, CI/CD, workflow automation, and reproducible research environments
Backend development, focusing on API design, server-side logic, and service architecture
Frontend development, with modern web technologies and frameworks
Cloud and networking concepts, including cloud infrastructure, container orchestration, and networking fundamentals
Core computer science topics, such as algorithms, data structures, and system-level concepts
Programming language syntax and usage, with practical examples across commonly used languages
Miscellaneous topics and supplementary notes
🚀 Featured Projects
snakemake-rnaseq pipeline: A modular and reproducible RNA-seq analysis pipeline supporting Docker, Conda, and CI/CD—designed for both research and teaching applications.
📬 Contact
This e-book is actively maintained and will be updated on an ongoing basis. Comments, corrections, and scholarly or technical feedback are welcome.
🌐 Personal Website: Visit My Website 📩 Contact: benson106075@gmail.com 🔗 LinkedIn: Benson Lee 💻 GitHub: benson1231 🐳 Docker Hub: benson1231
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